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Plant Transcription
Factor Database
v4.0
Previous version:
v3.0
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Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | PEQU_06014 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Orchidaceae; Epidendroideae; Vandeae; Aeridinae; Phalaenopsis
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| Family | ERF | ||||||||
| Protein Properties | Length: 188aa MW: 21062.2 Da PI: 10.0977 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 63.8 | 3.6e-20 | 38 | 89 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+f+ta eAa+a+++a+ k++g+
PEQU_06014 38 RYRGVRQRP-WGKFAAEIRDPKRRG--SRVWLGTFDTAVEAARAYDRAAFKMRGN 89
7********.**********96554..**************************95 PP
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| Protein Features ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Database | Entry ID | E-value | Start | End | InterPro ID | Description |
| SMART | SM00380 | 2.9E-39 | 38 | 102 | IPR001471 | AP2/ERF domain |
| Gene3D | G3DSA:3.30.730.10 | 3.9E-33 | 38 | 97 | IPR001471 | AP2/ERF domain |
| CDD | cd00018 | 1.74E-29 | 38 | 97 | No hit | No description |
| SuperFamily | SSF54171 | 1.9E-23 | 38 | 97 | IPR016177 | DNA-binding domain |
| Pfam | PF00847 | 1.3E-14 | 38 | 88 | IPR001471 | AP2/ERF domain |
| PROSITE profile | PS51032 | 24.381 | 38 | 96 | IPR001471 | AP2/ERF domain |
| PRINTS | PR00367 | 3.8E-11 | 39 | 50 | IPR001471 | AP2/ERF domain |
| PRINTS | PR00367 | 3.8E-11 | 62 | 78 | IPR001471 | AP2/ERF domain |
| Gene Ontology ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| GO Term | GO Category | GO Description | ||||
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
| GO:0010200 | Biological Process | response to chitin | ||||
| GO:0003677 | Molecular Function | DNA binding | ||||
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 188 aa Download sequence Send to blast |
MFDVGLKLNV PRSAAPKVEW IDGVVCEKRE PEVFDGNRYR GVRQRPWGKF AAEIRDPKRR 60 GSRVWLGTFD TAVEAARAYD RAAFKMRGNK AILNFPNEVG GSEDWVQPPP LALPEKRGRV 120 EMKGDGGRGV KKGRLEESEW NIPAAEPLTP SLWSGVWEGM DVKGFFDLPP LSPLSPHPQL 180 GFPRLTVI |
| 3D Structure ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |